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Applied Biological Chemistry
Fig. 6 | Applied Biological Chemistry

Fig. 6

From: Biodegradable properties of organophosphorus insecticides by the potential probiotic Lactobacillus plantarum WCP931 with a degrading gene (opdC)

Fig. 6

3D modeling of OpdC protein. The model was built using I-TASSER server (A). The α-helix, β-sheet, and random coil (η) are marked with red, yellow, and light blue color. The critical amino acid Ser116 side chains are marked with magenta color, while His233 and Glu52 are marked with yellow color. Ramacahndran plot analysis of the OpdC protein (B). Molecular docking model of the OpdC protein with chlorpyrifos (CP) (C). The critical amino acid (Ser116, His233, Glu 52) side chains within 5 Å of chlorpyrifos are marked in yellow. Visualization of ligand binding sites of OpdC within 5 Å of methyl parathion (D) and parathion (E)

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